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Computer-aided synthesis planning (CASP) has made significant strides in generating retrosynthetic pathways for simple molecules in a non-constrained fashion.
General methods for the construction of complex molecules
Elias James Corey · 1967
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Computer-assisted design of complex organic syntheses: Pathways for molecular synthesis can be devised with a computer and equipment for graphical communication
Elias James Corey and W Todd Wipke · 1969
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Lhasa—logic and heuristics applied to synthetic analysis
David A Pensak and Elias James Corey · 1977
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SMILES, a chemical language and information system. 1. introduction to methodology and encoding rules
David Weininger · 1988
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New and efficient approaches to the semisynthesis of taxol and its c-13 side chain analogs by means of β \beta -lactam synthon method
Iwao Ojima, Ivan Habus, Mangzhu Zhao, Martine Zucco, Young Hoon Park, Chung Ming Sun, and Thierry Brigaud · 1992
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Starting material oriented retrosynthetic analysis in the lhasa program. 1. general description
A Peter Johnson, Chris Marshall, and Philip N Judson · 1992
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The Logic of Chemical Synthesis
E. J. Corey and Xue-Min Chelg · 1995
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Aleem Gangjee, Ying Wang, Sherry F. Queener, and Roy L. Kisliuk · 1999
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Computer-assisted synthetic planning: the end of the beginning
Sara Szymkuć, Ewa P Gajewska, Tomasz Klucznik, Karol Molga, Piotr Dittwald, Michał Startek, Michał Bajczyk, and Bartosz A Grzybowski · 2016
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Chemical reactions from US patents (1976-Sep2016) http://doi.org/10.6084/m9.figshare.5104873.v1 , 6 2017
Daniel Lowe · 2017
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Retrosynthetic reaction prediction using neural sequence-to-sequence models
Bowen Liu, Bharath Ramsundar, Prasad Kawthekar, Jade Shi, Joseph Gomes, Quang Luu Nguyen, Stephen Ho, Jack Sloane, Paul Wender, and Vijay Pande · 2017
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Neural-symbolic machine learning for retrosynthesis and reaction prediction
Marwin HS Segler and Mark P Waller · 2017
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Computer-assisted retrosynthesis based on molecular similarity
Connor W Coley, Luke Rogers, William H Green, and Klavs F Jensen · 2017
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Navigating the chiral pool in the total synthesis of complex terpene natural products
Zachary G Brill, Matthew L Condakes, Chi P Ting, and Thomas J Maimone · 2017
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Planning chemical syntheses with deep neural networks and symbolic ai
Marwin HS Segler, Mike Preuss, and Mark P Waller · 2018
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Learning retrosynthetic planning through simulated experience
John S Schreck, Connor W Coley, and Kyle JM Bishop · 2019
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Algorithmic Discovery of Tactical Combinations for Advanced Organic Syntheses
Ewa P. Gajewska, Sara Szymkuć, Piotr Dittwald, Michał Startek, Oskar Popik, Jacek Mlynarski, and Bartosz A. Grzybowski · 2019
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Retro*: Learning retrosynthetic planning with neural guided A* search
Binghong Chen, Chengtao Li, Hanjun Dai, and Le Song · 2020
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Predicting retrosynthetic pathways using transformer-based models and a hyper-graph exploration strategy
Philippe Schwaller, Riccardo Petraglia, Valerio Zullo, Vishnu H Nair, Rico Andreas Haeuselmann, Riccardo Pisoni, Costas Bekas, Anna Iuliano, and Teodoro Laino · 2020
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Retrosynthesis prediction using an end-to-end graph generative architecture for molecular graph editing
Weihe Zhong, Ziduo Yang, and Calvin Yu-Chian Chen · 2023
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G 2 retro as a two-step graph generative models for retrosynthesis prediction
Ziqi Chen, Oluwatosin R Ayinde, James R Fuchs, Huan Sun, and Xia Ning · 2023
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Retrosynthetic planning with experience-guided monte carlo tree search
Siqi Hong, Hankz Hankui Zhuo, Kebing Jin, Guang Shao, and Zhanwen Zhou · 2023
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Retrosynthetic planning with dual value networks
Guoqing Liu, Di Xue, Shufang Xie, Yingce Xia, Austin Tripp, Krzysztof Maziarz, Marwin Segler, Tao Qin, Zongzhang Zhang, and Tie-Yan Liu · 2023
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Re-evaluating retrosynthesis algorithms with syntheseus
Krzysztof Maziarz, Austin Tripp, Guoqing Liu, Megan Stanley, Shufang Xie, Piotr Gaiński, Philipp Seidl, and Marwin Segler · 2023
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AiZynthFinder: a fast, robust and flexible open-source software for retrosynthetic planning
Samuel Genheden, Amol Thakkar, Veronika Chadimová, Jean-Louis Reymond, Ola Engkvist, and Esben Bjerrum · 2020
Cited alongside, same era.
Datasets and their influence on the development of computer assisted synthesis planning tools in the pharmaceutical domain
Amol Thakkar, Thierry Kogej, Jean-Louis Reymond, Ola Engkvist, and Esben Jannik Bjerrum · 2020
Cited alongside, same era.
Combining retrosynthesis and mixed-integer optimization for minimizing the chemical inventory needed to realize a who essential medicines list
Hanyu Gao, Connor W Coley, Thomas J Struble, Linyan Li, Yujie Qian, William H Green, and Klavs F Jensen · 2020
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Iridium-catalysed reductive deoxygenation of ketones with formic acid as traceless hydride donor
Zhiheng Yang, Xueya Zhu, Shiyi Yang, Weiyan Cheng, Xiaojian Zhang, and Zhanhui Yang · 2020
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Zhengkai Tu and Connor W Coley · 2021
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Molecule edit graph attention network: Modeling chemical reactions as sequences of graph edits
Mikolaj Sacha, Mikolaj Blaz, Piotr Byrski, Pawel Dabrowski-Tumanski, Mikolaj Chrominski, Rafal Loska, Pawel Wlodarczyk-Pruszynski, and Stanislaw Jastrzebski · 2021
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Self-improved retrosynthetic planning
Junsu Kim, Sungsoo Ahn, Hankook Lee, and Jinwoo Shin · 2021
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Enhancing diversity in language based models for single-step retrosynthesis
Alessandra Toniato, Alain C Vaucher, Philippe Schwaller, and Teodoro Laino · 2023
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Unbiasing retrosynthesis language models with disconnection prompts
Amol Thakkar, Alain C Vaucher, Andrea Byekwaso, Philippe Schwaller, Alessandra Toniato, and Teodoro Laino · 2023
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Application of automated network generation for retrosynthetic planning of potential corrosion inhibitors
Lauren M Lopez, Quan Zhang, Orion Dollar, Jim Pfaendtner, Brent H Shanks, and Linda J Broadbelt · 2024
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Computational synthesis design for controlled degradation and revalorization
Anna Żądło-Dobrowolska, Karol Molga, Olga O Kolodiazhna, Sara Szymkuć, Martyna Moskal, Rafał Roszak, and Bartosz A Grzybowski · 2024
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Double-ended synthesis planning with goal-constrained bidirectional search
Kevin Yu, Jihye Roh, Ziang Li, Wenhao Gao, Runzhong Wang, and Connor W Coley · 2024
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Models matter: the impact of single-step retrosynthesis on synthesis planning
Paula Torren-Peraire, Alan Kai Hassen, Samuel Genheden, Jonas Verhoeven, Djork-Arné Clevert, Mike Preuss, and Igor V. Tetko · 2024
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Constrained synthesis planning with disconnection-aware transformer and multi-objective search
Annie M Westerlund, Lakshidaa Saigiridharan, and Samuel Genheden · 2024
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Jeff Guo and Philippe Schwaller · 2024
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