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Systematic reviews are comprehensive reviews of the literature for a highly focused research question.
Language Models Are Few-Shot Learners
Tom Brown, Benjamin Mann, Nick Ryder, Melanie Subbiah, Jared D. Kaplan, Prafulla Dhariwal, Arvind Neelakantan, Pranav Shyam, Girish Sastry, and Amanda Askell. 2020 · 1901
Earlier work this paper cites.
searchrefiner: A Query Visualisation and Understanding Tool for Systematic Reviews. In Proceedings of the 27th ACM International Conference on Information and Knowledge Management . ACM, 1939–1942
Harrisen Scells and Guido Zuccon. 2018b · 1942
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Twelve Tips for Undertaking a Systematic Review
Scott Reeves, Ivan Koppel, Hugh Barr, Della Freeth, and Marilyn Hammick. 2002 · 2002
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Effectiveness and efficiency of search methods in systematic reviews of complex evidence: audit of primary sources
Trisha Greenhalgh and Richard Peacock. 2005 · 2005
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Reducing workload in systematic review preparation using automated citation classification
A.M. Cohen, W.R. Hersh, K. Peterson, and P.Y. Yen. 2006 · 2006
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Errors in Search Strategies Were Identified by Type and Frequency
Margaret Sampson and Jessie McGowan. 2006 · 2006
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Answering Clinical Questions with Knowledge-Based and Statistical Techniques
Dina Demner-Fushman and Jimmy Lin. 2007 · 2007
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Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing
Yu Gu, Robert Tinn, Hao Cheng, Michael Lucas, Naoto Usuyama, Xiaodong Liu, Tristan Naumann, Jianfeng Gao, and Hoifung Poon. 2020 · 2007
Earlier work this paper cites.
Facilitating Biomedical Systematic Reviews Using Ranked Text Retrieval and Classification. In Proceedings of the 13th Australasian Document Computing Symposium
D. Martinez, S. Karimi, L. Cavedon, and T. Baldwin. 2008 · 2008
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Methods for the thematic synthesis of qualitative research in systematic reviews
James Thomas and Angela Harden. 2008 · 2008
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The Challenge of High Recall in Biomedical Systematic Search. In Proceedings of the 3rd International Workshop on Data and Text Mining in Bioinformatics . 89–92
Sarvnaz Karimi, Justin Zobel, Stefan Pohl, and Falk Scholer. 2009 · 2009
Earlier work this paper cites.
Identifying Treatments, Groups, and Outcomes in Medical Abstracts. In Proceedings of the 6th Midwest Computational Linguistics Colloquium
Rodney Summerscales, Shlomo Argamon, Jordan Hupert, and Alan Schwartz. 2009 · 2009
Earlier work this paper cites.
Clinical Information Retrieval Using Document and PICO Structure. In Human Language Technologies: The 2010 Annual Conference of the North American Chapter of the Association for Computational Linguistics . 822–830
Florian Boudin, Jian-Yun Nie, and Martin Dawes. 2010 · 2010
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Identifying Nurse Staffing Research in Medline: Development and Testing of Empirically Derived Search Strategies with the PubMed Interface
Michael Simon, Elke Hausner, Susan F Klaus, and Nancy E Dunton. 2010 · 2010
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Automatic Classification of Sentences to Support Evidence Based Medicine
S.N. Kim, D. Martinez, L. Cavedon, and L. Yencken. 2011 · 2011
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Automatic Summarization of Results from Clinical Trials. In Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine . 372–377
Rodney L Summerscales, Shlomo Argamon, Shangda Bai, Jordan Hupert, and Alan Schwartz. 2011 · 2011
Earlier work this paper cites.
Routine development of objectively derived search strategies
Elke Hausner, Siw Waffenschmidt, Thomas Kaiser, and Michael Simon. 2012 · 2012
Earlier work this paper cites.
Automated Extraction of Reported Statistical Analyses: Towards a Logical Representation of Clinical Trial Literature. In AMIA Annual Symposium Proceedings , Vol. 2012. 350
William Hsu, William Speier, and Ricky K Taira. 2012 · 2012
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PubMed: the bibliographic database
Kathi Canese and Sarah Weis. 2013 · 2013
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Systematic Reviewing
Justin Clark. 2013 · 2013
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‘Clustering’ Documents Automatically to Support Scoping Reviews of Research: A Case Study
Claire Stansfield, James Thomas, and Josephine Kavanagh. 2013 · 2013
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Automatic Text Classification to Support Systematic Reviews in Medicine
JJ García Adeva, JM Pikatza Atxa, M Ubeda Carrillo, and E Ansuategi Zengotitabengoa. 2014 · 2014
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Reducing systematic review workload through certainty-based screening
M. Miwa, J. Thomas, A. O’Mara-Eves, and S. Ananiadou. 2014 · 2014
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Development of search strategies for systematic reviews: validation showed the noninferiority of the objective approach
Elke Hausner, Charlotte Guddat, Tatjana Hermanns, Ulrike Lampert, and Siw Waffenschmidt. 2015 · 2015
Earlier work this paper cites.
Advanced Analytics for the Automation of Medical Systematic Reviews
Prem Timsina, Jun Liu, and Omar El-Gayar. 2016 · 2016
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Ranking Abstracts to Identify Relevant Evidence for Systematic Reviews: The University of Sheffield’s Approach to CLEF eHealth 2017 Task 2.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Amal Alharbi and Mark Stevenson. 2017 · 2017
Earlier work this paper cites.
Combining Inter-Review Learning-to-Rank and Intra-Review Incremental Training for Title and Abstract Screening in Systematic Reviews.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Antonios Anagnostou, Athanasios Lagopoulos, Grigorios Tsoumakas, and Ioannis P Vlahavas. 2017 · 2017
Earlier work this paper cites.
ECNU at 2017 eHealth Task 2: Technologically Assisted Reviews in Empirical Medicine.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Jiayi Chen, Su Chen, Yang Song, Hongyu Liu, Yueyao Wang, Qinmin Hu, Liang He, and Yan Yang. 2017 · 2017
Cited alongside, same era.
An Interactive Two-Dimensional Approach to Query Aspects Rewriting in Systematic Reviews. IMS Unipd at CLEF eHealth Task 2.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Giorgio Maria Di Nunzio, Federica Beghini, Federica Vezzani, and Geneviève Henrot. 2017 · 2017
Cited alongside, same era.
Ranking and Feedback-Based Stopping for Recall-Centric Document Retrieval.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Noah Hollmann and Carsten Eickhoff. 2017 · 2017
Cited alongside, same era.
CLEF 2017 Technologically Assisted Reviews in Empirical Medicine Overview. In CLEF’17
E. Kanoulas, D. Li, L. Azzopardi, and R. Spijker. 2017 · 2017
Cited alongside, same era.
Multi-stage document ranking with BERT
Rodrigo Nogueira, Wei Yang, Kyunghyun Cho, and Jimmy Lin. 2019 · 2019
Later among the works it cites.
Limsi@ Clef Ehealth 2017 Task 2: Logistic Regression for Automatic Article Ranking. In CEUR Workshop Proceedings: Working Notes of CLEF 2019: Conference and Labs of the Evaluation Forum
Christopher Norman12, Mariska Leeflang, and Aurélie Névéol. 2017 · 2019
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Errors in Search Strategies Used in Systematic Reviews and Their Effects on Information Retrieval
José Antonio Salvador-Oliván, Gonzalo Marco-Cuenca, and Rosario Arquero-Avilés. 2019 · 2019
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Automatic Boolean Query Refinement for Systematic Review Literature Search. In The World Wide Web Conference . 1646–1656
Harrisen Scells, Guido Zuccon, and Bevan Koopman. 2019 · 2019
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A full systematic review was completed in 2 weeks using automation tools: a case study
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A Study of Convolutional Neural Networks for Clinical Document Classification in Systematic Reviews: Sysreview at CLEF eHealth 2017. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Grace Eunkyung Lee. 2017 · 2017
Cited alongside, same era.
Automating systematic reviews
John Rathbone. 2017 · 2017
Cited alongside, same era.
QUT Ielab at CLEF eHealth 2017 Technology Assisted Reviews Track: Initial Experiments with Learning to Rank. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Harrisen Scells, Guido Zuccon, Anthony Deacon, and Bevan Koopman. 2017 · 2017
Cited alongside, same era.
Identifying Diagnostic Test Accuracy Publications Using a Deep Model. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum , Vol. 1866
Gaurav Singh, Iain Marshall, James Thomas, and Byron Wallace. 2017 · 2017
Cited alongside, same era.
IIIT-H at CLEF eHealth 2017 Task 2: Technologically Assisted Reviews in Empirical Medicine.. In CEUR Workshop Proceedings: Working Notes of CLEF 2017: Conference and Labs of the Evaluation Forum
Jaspreet Singh and Lini Thomas. 2017 · 2017
Cited alongside, same era.
RevManHAL: towards automatic text generation in systematic reviews
Mercedes Torres Torres and Clive E Adams. 2017 · 2017
Cited alongside, same era.
Attention is all you need
Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit, Llion Jones, Aidan N Gomez, Łukasz Kaiser, and Illia Polosukhin. 2017 · 2017
Cited alongside, same era.
Zhe Yu and Tim Menzies. 2017 · 2017
Cited alongside, same era.
Justin Clark, Paul Glasziou, Chris Del Mar, Alexandra Bannach-Brown, Paulina Stehlik, and Anna Mae Scott. 2020a · 2020
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Improving the Translation of Search Strategies Using the Polyglot Search Translator: A Randomized Controlled Trial
Justin Michael Clark, Sharon Sanders, Matthew Carter, David Honeyman, Gina Cleo, Yvonne Auld, Debbie Booth, Patrick Condron, Christine Dalais, Sarah Bateup, et al · 2020
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Systematic review automation tools for end-to-end query formulation. In Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval . 2141–2144
Hang Li, Harrisen Scells, and Guido Zuccon. 2020 · 2020
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A Comparison of Automatic Boolean Query Formulation for Systematic Reviews
Harrisen Scells, Guido Zuccon, and Bevan Koopman. 2020a · 2020
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Automatic Boolean Query Formulation for Systematic Review Literature Search. In Proceedings of The Web Conference 2020 . 1071–1081
Harrisen Scells, Guido Zuccon, Bevan Koopman, and Justin Clark. 2020b · 2020
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Sampling Query Variations for Learning to Rank to Improve Automatic Boolean Query Generation in Systematic Reviews. In Proceedings of The Web Conference 2020 . 3041–3048
Harrisen Scells, Guido Zuccon, Mohamed A Sharaf, and Bevan Koopman. 2020d · 2020
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Neural Text Generation for Query Expansion in Information Retrieval. In IEEE/WIC/ACM International Conference on Web Intelligence . ACM, ESSENDON VIC Australia, 202–209
Vincent Claveau. 2021 · 2021
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Prompt Programming for Large Language Models: Beyond the Few-Shot Paradigm. In Extended Abstracts of the 2021 CHI Conference on Human Factors in Computing Systems . ACM, Yokohama Japan, 1–7
Laria Reynolds and Kyle McDonell. 2021 · 2021
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Mesh term suggestion for systematic review literature search. In Proceedings of the 25th Australasian Document Computing Symposium . 1–8
Shuai Wang, Hang Li, Harrisen Scells, Daniel Locke, and Guido Zuccon. 2021 · 2021
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Systematic Literature Review Search Query Refinement Pipeline: Incremental Enrichment and Adaptation. In International Conference on Advanced Information Systems Engineering . Springer, 129–146
Maisie Badami, Boualem Benatallah, and Marcos Baez. 2022 · 2022
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A survey of pretrained language models based text generation
Junyi Li, Tianyi Tang, Wayne Xin Zhao, Jian-Yun Nie, and Ji-Rong Wen. 2022 · 2022
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Design Guidelines for Prompt Engineering Text-to-Image Generative Models. In Proceedings of the 2022 CHI Conference on Human Factors in Computing Systems (CHI ’22) . Association for Computing Machinery, New York, NY, USA, 1–23
Vivian Liu and Lydia B Chilton. 2022 · 2022
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BioGPT: Generative Pre-Trained Transformer for Biomedical Text Generation and Mining
Renqian Luo, Liai Sun, Yingce Xia, Tao Qin, Sheng Zhang, Hoifung Poon, and Tie-Yan Liu. 2022 · 2022
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Search strategy formulation for systematic reviews: Issues, challenges and opportunities
Andrew MacFarlane, Tony Russell-Rose, and Farhad Shokraneh. 2022 · 2022
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A Taxonomy of Prompt Modifiers for Text-To-Image Generation
Jonas Oppenlaender. 2022 · 2022
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Towards semantic-driven boolean query formalization for biomedical systematic literature reviews
Mohammadreza Pourreza and Faezeh Ensan. 2022 · 2022
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The Impact of Query Refinement on Systematic Review Literature Search: A Query Log Analysis. In Proceedings of the 2022 ACM SIGIR International Conference on Theory of Information Retrieval . 34–42
Harrisen Scells, Connor Forbes, Justin Clark, Bevan Koopman, and Guido Zuccon. 2022 · 2022
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Shuai Wang, Hang Li, and Guido Zuccon. 2022a · 2022
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Automated MeSH Term Suggestion for Effective Query Formulation in Systematic Reviews Literature Search
Shuai Wang, Harrisen Scells, Bevan Koopman, and Guido Zuccon. 2022c · 2022
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ChatGPT is not all you need. A State of the Art Review of large Generative AI models
Roberto Gozalo-Brizuela and Eduardo C Garrido-Merchan. 2023 · 2023
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Can Large Language Models Reason about Medical Questions?
Valentin Liévin, Christoffer Egeberg Hother, and Ole Winther. 2023 · 2023
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Figure Mining for Biomedical Research
Raul Rodriguez-Esteban and Ivan Iossifov. 2009 · 2084
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