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Detection of rare variants by resequencing is important for the identification of individuals carrying disease variants.
Allele frequency distributions in pooled DNA samples: applications to mapping complex disease genes
S.H. Shaw, M.M. Carrasquillo, C. Kashuk, E.G. Puffenberger, and A. Chakravarti · 1998
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Quantitative RT-PCR: pitfalls and potential
W.M. Freeman, S.J. Walker, and K.E. Vrana · 1999
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Combinatorial group testing and its applications
D. Du and F.K. Hwang · 2000
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Universal, robust, highly quantitative SNP allele frequency measurement in DNA pools
N. Norton, N.M. Williams, H.J. Williams, G. Spurlock, G. Kirov, D.W. Morris, B. Hoogendoorn, M.J. Owen, and M.C. O’Donovan · 2002
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Multiple rare alleles contribute to low plasma levels of HDL cholesterol
J.C. Cohen, R.S. Kiss, A. Pertsemlidis, Y.L. Marcel, R. McPherson, and H.H. Hobbs · 2004
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Decoding randomly ordered DNA arrays
K.L. Gunderson, S. Kruglyak, M.S. Graige, F. Garcia, B.G. Kermani, C. Zhao, D. Che, T. Dickinson, E. Wickham, J. Bierle, et al · 2004
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Stable signal recovery from incomplete and inaccurate measurements
E.J. Candes, J. Romberg, and T. Tao · 2005
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Error correction via linear programming
E.J. Candes, M. Rudelson, T. Tao, and R. Vershynin · 2005
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Decoding by linear programming
E.J. Candes and T. Tao · 2005
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Sparse nonnegative solution of underdetermined linear equations by linear programming
D.L. Donoho and J. Tanner · 2005
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Genome-wide association studies for common diseases and complex traits
J.N. Hirschhorn and M.J. Daly · 2005
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Complement factor H polymorphism in age-related macular degeneration
R.J. Klein, C. Zeiss, E.Y. Chew, J.Y. Tsai, R.S. Sackler, C. Haynes, A.K. Henning, J.P. SanGiovanni, S.M. Mane, and Mayne, S.T. et al · 2005
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Genome sequencing in microfabricated high-density picolitre reactors
M. Margulies, M. Egholm, W.E. Altman, S. Attiya, J.S. Bader, L.A. Bemben, J. Berka, M.S. Braverman, Y.J. Chen, Z. Chen, et al · 2005
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Data streams: Algorithms and applications
S. Muthukrishnan · 2005
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Compressive sampling
E.J. Candes · 2006
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Near-optimal signal recovery from random projections: Universal encoding strategies?
E.J. Candes and T. Tao · 2006
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Compressed sensing
D.L. Donoho · 2006
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For most large underdetermined systems of linear equations the minimal l1-norm solution is also the sparsest solution
D.L. Donoho · 2006
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Group testing in statistical signal recovery
A.C. Gilbert and M.J. Strauss · 2006
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Direct selection of human genomic loci by microarray hybridization
T.J. Albert, M.N. Molla, D.M. Muzny, L. Nazareth, D. Wheeler, X. Song, T.A. Richmond, C.M. Middle, M.J. Rodesch, C.J. Packard, G.M. Weinstock, and Gibbs R.A · 2007
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Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
P.R. Burton, D.G. Clayton, L.R. Cardon, N. Craddock, P. Deloukas, A. Duncanson, D.P. Kwiatkowski, M.I. McCarthy, W.H. Ouwehand, N.J. Samani, et al · 2007
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Gradient projection for sparse reconstruction: Application to compressed sensing and other inverse problems
Single-pixel imaging via compressive sampling
M. Duarte, M. Davenport, D. Takhar, J. Laska, T. Sun, K. Kelly, and R. Baraniuk · 2008
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Group testing and sparse signal recovery
A.C. Gilbert, M.A. Iwen, and M.J. Strauss · 2008
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Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
M. Hamady, J.J. Walker, J.K. Harris, N.J. Gold, and R. Knight · 2008
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Single-molecule DNA sequencing of a viral genome
T.D. Harris, P.R. Buzby, H. Babcock, E. Beer, J. Bowers, I. Braslavsky, M. Causey, J. Colonell, J. DiMeo, J.W. Efcavitch, et al · 2008
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Mapping short DNA sequencing reads and calling variants using mapping quality scores
H. Li, J. Ruan, and R. Durbin · 2008
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The impact of next-generation sequencing technology on genetics
E.R. Mardis · 2008
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M.A.T. Figueiredo, R.D. Nowak, and S.J. Wright · 2007
Cited alongside, same era.
An interior-point method for large-scale l1-regularized least squares
S.J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky · 2007
Cited alongside, same era.
Compressed wavefield extrapolation
T.T. Lin and F.J. Herrmann · 2007
Cited alongside, same era.
Sparse mri: The application of compressed sensing for rapid MR imaging
M. Lustig, D.L. Donoho, and J.M. Pauly · 2007
Cited alongside, same era.
Schizophrenia: a common disease caused by multiple rare alleles
J.M. McClellan, E. Susser, and M.C. King · 2007
Cited alongside, same era.
A genome-wide association study identifies novel risk loci for type 2 diabetes
R. Sladek, G. Rocheleau, J. Rung, C. Dina, L. Shen, D. Serre, P. Boutin, D. Vincent, A. Belisle, and Hadjadj, S. et al · 2007
Cited alongside, same era.
Association mapping using pooled DNA
H. Yang and C.S.J. Fann · 2007
Cited alongside, same era.
Later among the works it cites.
NESTA: A Fast and Accurate First-order Method for Sparse Recovery
S. Becker, J. Bobin, and E.J. Candes · 2009
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Compressive sensing dna microarrays
W. Dai, M.A. Sheikh, O. Milenkovic, and R.G. Baraniuk · 2009
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Dna Sudoku-harnessing high-throughput sequencing for multiplexed specimen analysis
Y. Erlich, K. Chang, A. Gordon, R. Ronen, O. Navon, M. Rooks, and G.J. Hannon · 2009
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Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
A. Gnirke, A. Melnikov, J. Maguire, P. Rogov, E.M. LeProust, W. Brockman, T. Fennell, G. Giannoukos, S. Fisher, C. Russ, S. Gabriel, D.B. Jaffe, E.S. Lander, and C. Nusbaum · 2009
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SNP frequency estimation using massively parallel sequencing of pooled dna
M. Ingman and U. Gyllensten · 2009
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Bayescall: A model-based basecalling algorithm for high-throughput short-read sequencing
W.C. Kao, K. Stevens, and Y.S. Song · 2009
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Discovery of Rare Variants via Sequencing: Implications for the Design of Complex Trait Association Studies
B. Li and S.M. Leal · 2009
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Targeted capture and massively parallel sequencing of 12 human exomes
S.B. Ng, E.H. Turner, P.D. Robertson, S.D. Flygare, A.W. Bigham, C. Lee, T. Shaffer, M. Wong, A. Bhattacharjee, E.E. Eichler, M. Bamshad, D.A. Nickerson, and J. Shendure · 2009
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Overlapping pools for high-throughput targeted resequencing
S. Prabhu and I. Pe’er · 2009
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