2022

Equivariant Diffusion for Molecule Generation in 3D

Hoogeboom, Emiel, Satorras, Victor Garcia, Vignac, Clément et al.

Understand

This work introduces a diffusion model for molecule generation in 3D that is equivariant to Euclidean transformations.

  • Our E(3) Equivariant Diffusion Model (EDM) learns to denoise a diffusion process with an equivariant network that jointly operates on both continuous (atom coordinates) and categorical features (atom types).
  • In addition, we provide a probabilistic analysis which admits likelihood computation of molecules using our model.
  • Experimentally, the proposed method significantly outperforms previous 3D molecular generative methods regarding the quality of generated samples and efficiency at training time.

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