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UniProt: the universal protein knowledgebase in 2021
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Transformers: State-of-the-art natural language processing
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Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences
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Chemformer: A pre-trained transformer for computational chemistry
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Masked graph modeling for molecule generation
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Data-driven molecular design for discovery and synthesis of novel ligands: a case study on SARS-CoV-2
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Bertology meets biology: Interpreting attention in protein language models
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Pretrained transformers as universal computation engines
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Deberta: decoding-enhanced bert with disentangled attention
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Frozen pretrained transformers as universal computation engines
Kevin Lu, Aditya Grover, Pieter Abbeel, and Igor Mordatch · 2022
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Learning to extend molecular scaffolds with structural motifs
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Biological sequence design with gflownets
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Geodiff: A geometric diffusion model for molecular conformation generation
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Unified deep learning model for multitask reaction predictions with explanation
Jieyu Lu and Yingkai Zhang · 2022
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Multitask prompted training enables zero-shot task generalization
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Gt4sd: Generative toolkit for scientific discovery
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