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Medical image registration is an active research topic and forms a basis for many medical image analysis tasks.
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Berthold KP Horn and Brian G Schunck · 1981
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Representations of quasi-newton matrices and their use in limited memory methods
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An infinite dimensional group approach for physics based models in pattern recognition
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Multi-modal volume registration by maximization of mutual information
William M Wells, Paul Viola, Hideki Atsumi, Shin Nakajima, and Ron Kikinis · 1996
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Alignment by maximization of mutual information
Paul Viola and William M Wells III · 1997
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Variational problems on flows of diffeomorphisms for image matching
Paul Dupuis and Ulf Grenander · 1998
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Image matching as a diffusion process: an analogy with maxwell’s demons
J-P Thirion · 1998
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Automated image registration: I. general methods and intrasubject, intramodality validation
Roger P Woods, Scott T Grafton, Colin J Holmes, Simon R Cherry, and John C Mazziotta · 1998
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Nonrigid registration using free-form deformations: application to breast mr images
Daniel Rueckert, Luke I Sonoda, Carmel Hayes, Derek LG Hill, Martin O Leach, and David J Hawkes · 1999
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3d non-rigid registration by gradient descent on a gaussian-windowed similarity measure using convolutions
Pascal Cachier and Xavier Pennec · 2000
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A generic framework for non-rigid registration based on non-uniform multi-level free-form deformations
Julia A Schnabel, Daniel Rueckert, Marcel Quist, Jane M Blackall, Andy D Castellano-Smith, Thomas Hartkens, Graeme P Penney, Walter A Hall, Haiying Liu, Charles L Truwit, et al · 2001
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Engineering and algorithm design for an image processing api: a technical report on itk-the insight toolkit
Terry S Yoo, Michael J Ackerman, William E Lorensen, Will Schroeder, Vikram Chalana, Stephen Aylward, Dimitris Metaxas, and Ross Whitaker · 2002
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Image quality assessment: from error visibility to structural similarity
Zhou Wang, A. C. Bovik, H. R. Sheikh, and E. P. Simoncelli · 2004
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Computing large deformation metric mappings via geodesic flows of diffeomorphisms
M. Faisal Beg, Michael I. Miller, Alain Trouvé, and Laurent Younes · 2005
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A log-euclidean framework for statistics on diffeomorphisms
Vincent Arsigny, Olivier Commowick, Xavier Pennec, and Nicholas Ayache · 2006
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Intensity gradient based registration and fusion of multi-modal images
Eldad Haber and Jan Modersitzki · 2006
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A fast diffeomorphic image registration algorithm
John Ashburner · 2007
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Registration of anatomical images using geodesic paths of diffeomorphisms parameterized with stationary vector fields
M. Hernandez, M. N. Bossa, and S. Olmos · 2007
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Dense image registration through mrfs and efficient linear programming
Ben Glocker, Nikos Komodakis, Georgios Tziritas, Nassir Navab, and Nikos Paragios · 2008
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A framework for evaluation of deformable image registration spatial accuracy using large landmark point sets
A guide to convolution arithmetic for deep learning
Vincent Dumoulin and Francesco Visin · 2016
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Bilateral regularization in reproducing kernel hilbert spaces for discontinuity preserving image registration
Christoph Jud, Nadia Möri, Benedikt Bitterli, and Philippe C Cattin · 2016
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Sparse kernel machines for discontinuous registration and nonstationary regularization
Christoph Jud, Nadia Mori, and Philippe C Cattin · 2016
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Simpleelastix: A user-friendly, multi-lingual library for medical image registration
Kasper Marstal, Floris Berendsen, Marius Staring, and Stefan Klein · 2016
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An overview of gradient descent optimization algorithms
Sebastian Ruder · 2016
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Richard Castillo, Edward Castillo, Rudy Guerra, Valen E Johnson, Travis McPhail, Amit K Garg, and Thomas Guerrero · 2009
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FAIR: flexible algorithms for image registration
Jan Modersitzki · 2009
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Elastix: a toolbox for intensity-based medical image registration
Stefan Klein, Marius Staring, Keelin Murphy, Max A Viergever, and Josien PW Pluim · 2010
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A reproducible evaluation of ants similarity metric performance in brain image registration
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, and James C Gee · 2011
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Spatiotemporal motion estimation for respiratory-correlated imaging of the lungs
Jef Vandemeulebroucke, Simon Rit, Jan Kybic, Patrick Clarysse, and David Sarrut · 2011
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The design of simpleitk
Bradley Christopher Lowekamp, David T Chen, Luis Ibáñez, and Daniel Blezek · 2013
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Adam: A method for stochastic optimization
Diederik P Kingma and Jimmy Ba · 2014
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A survey of medical image registration - under review
M.A. Viergever, J.B.A. Maintz, S. Klein, K. Murphy, M. Staring, and J.P.W. Pluim · 2016
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Survey of non-rigid registration tools in medicine
András P Keszei, Benjamin Berkels, and Thomas M Deserno · 2017
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Gaussian process morphable models
Marcel Lüthi, Thomas Gerig, Christoph Jud, and Thomas Vetter · 2017
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Automatic differentiation in pytorch
Adam Paszke, Sam Gross, Soumith Chintala, Gregory Chanan, Edward Yang, Zachary DeVito, Zeming Lin, Alban Desmaison, Luca Antiga, and Adam Lerer · 2017
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Isotropic total variation regularization of displacements in parametric image registration
Valery Vishnevskiy, Tobias Gass, Gabor Szekely, Christine Tanner, and Orcun Goksel · 2017
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Scalismo - scalable image analysis and shape modelling
Ghazi Bouabene, Thomas Gerig, Marcel Lüthi, Andreas Forster, Dennis Madsen, and Dana Rahbani · 2018
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An inhomogeneous multi-resolution regularization concept for discontinuity preserving image registration
Christoph Jud, Robin Sandkühler, and Philippe C Cattin · 2018
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Learning structured deformations using diffeomorphic registration
Julian Krebs, Tommaso Mansi, Boris Mailhé, Nicholas Ayache, and Hervé Delingette · 2018
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Adaptive graph diffusion regularisation for discontinuity preserving image registration
Robin Sandkühler, Christoph Jud, Simon Pezold, and Philippe C Cattin · 2018
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